3MGT
Crystal structure of a H5-specific CTL epitope variant derived from H5N1 influenza virus in complex with HLA-A*0201
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 |
| Temperature [K] | 77 |
| Detector technology | IMAGE PLATE |
| Collection date | 2009-02-28 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 |
| Unit cell lengths | 63.172, 79.304, 86.739 |
| Unit cell angles | 90.02, 89.99, 89.96 |
Refinement procedure
| Resolution | 25.535 - 2.197 |
| R-factor | 0.1943 |
| Rwork | 0.192 |
| R-free | 0.23670 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1jf1 |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.817 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((phenix.refine)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 25.535 | 2.280 |
| High resolution limit [Å] | 2.197 | 2.197 |
| Total number of observations | 165362 | |
| Number of reflections | 72653 | |
| <I/σ(I)> | 23 | 23 |
| Completeness [%] | 95.8 | |
| Redundancy | 2.14 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | 25mM MES(pH 6.5), 16% PEG 6000, VAPOR DIFFUSION, HANGING DROP, temperature 291K |
