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3LON

HCV NS3-4a protease domain with ketoamide inhibitor narlaprevir

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2005-04-15
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameH 3 2
Unit cell lengths224.392, 224.392, 75.331
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution8.000 - 2.200
Rwork0.204
R-free0.26900
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)208M
RMSD bond length0.009
RMSD bond angle1.942
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (98.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.240
High resolution limit [Å]2.2002.200
Rmerge0.0450.633
Number of reflections32304
<I/σ(I)>24.91.26
Completeness [%]88.024.8
Redundancy9.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6277Crystallization was performed by the vapor diffusion method using hanging drops (4 L protein solution mixed with 4 L (0.75 - 1.00) M NaCl - 0.1 M MES - 0.1 M Na/K PO4, pH 5.6 - 6.2) suspended over 1 mL reservoir solutions of (1.25 - 1.50) M NaCl - 0.1 M MES - 0.1 M Na/K PO4 - 5 mM -mercaptoethanol, pH 5.6-6.2. The trays were set at 4C for 5-7 days to control nucleation, followed by incubation for 3 weeks at 12C to maximize crystal growth., VAPOR DIFFUSION, HANGING DROP, temperature 277K

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PDB entries from 2024-05-15

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