3LMY
The Crystal Structure of beta-hexosaminidase B in complex with Pyrimethamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-11-30 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97946 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 113.898, 113.898, 397.427 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 35.900 - 2.800 |
R-factor | 0.197 |
Rwork | 0.194 |
R-free | 0.25200 |
Structure solution method | Isomorphous replacement |
Starting model (for MR) | 1nou |
RMSD bond length | 0.018 |
RMSD bond angle | 1.882 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CCP4 |
Refinement software | REFMAC (5.5.0055) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.900 | 2.890 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.174 | 0.501 |
Number of reflections | 35710 | |
<I/σ(I)> | 14 | 2.1 |
Completeness [%] | 92.1 | 87.5 |
Redundancy | 8.1 | 5.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 50% ammonium sulfate, 50mM potassium phosphate, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 298K |