Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3KT0

Crystal structure of S. cerevisiae tryptophanyl-tRNA synthetase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-6A
Synchrotron sitePhoton Factory
BeamlineBL-6A
Temperature [K]100
Detector technologyCCD
Collection date2006-06-10
DetectorADSC QUANTUM 4r
Wavelength(s)1.0000
Spacegroup nameP 43 21 2
Unit cell lengths55.912, 55.912, 313.784
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.450 - 2.100
R-factor0.208
Rwork0.207
R-free0.23800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1o5t
RMSD bond length0.008
RMSD bond angle1.075
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.180
High resolution limit [Å]2.1004.5202.100
Rmerge0.1020.0490.586
Number of reflections29469
<I/σ(I)>7.2
Completeness [%]96.687.798.5
Redundancy9.17.89.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52770.1M MES buffer, 0.05M CsCl, 30% v/v Jeffamine M-600 reagent, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon