3KOQ
Crystal structure of a nitroreductase family protein (cd3355) from clostridium difficile 630 at 1.58 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-03-19 |
Detector | MARMOSAIC 325 mm CCD |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.369, 87.924, 87.501 |
Unit cell angles | 90.00, 102.33, 90.00 |
Refinement procedure
Resolution | 29.374 - 1.580 |
R-factor | 0.18 |
Rwork | 0.178 |
R-free | 0.21800 |
Structure solution method | SAD |
RMSD bond length | 0.017 |
RMSD bond angle | 1.594 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.374 | 29.370 | 1.620 |
High resolution limit [Å] | 1.580 | 7.070 | 1.580 |
Rmerge | 0.123 | 0.059 | 0.750 |
Total number of observations | 4779 | 32610 | |
Number of reflections | 117477 | ||
<I/σ(I)> | 9.5 | 29.4 | 1.6 |
Completeness [%] | 99.6 | 98.8 | 98.7 |
Redundancy | 3.8 | 3.5 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 293 | 20.0000% 2-propanol, 20.0000% polyethylene glycol 4000, 0.1M citric acid pH 5.6, 0.001 M NADH (Nicotinamide-adenine dinucleotide, reduced), NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K |