3KHP
Crystal structure of a possible dehydrogenase from Mycobacterium tuberculosis at 2.3A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-10-16 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.290, 135.170, 162.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.300 |
R-factor | 0.209 |
Rwork | 0.206 |
R-free | 0.26300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1s9c modified with ccp4 program chainsaw |
RMSD bond length | 0.017 |
RMSD bond angle | 1.565 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0104) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.360 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.095 | 0.514 |
Number of reflections | 62471 | |
<I/σ(I)> | 18.74 | 3.7 |
Completeness [%] | 97.9 | 80.4 |
Redundancy | 7.1 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 290 | Wizard screen condition g12, 1M Na/K tartrate, 100mM MES pH 6.0, MYTUD.00504.A AT 56MG/ml, VAPOR DIFFUSION, SITTING DROP, temperature 290K |