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3KEX

Crystal structure of the catalytically inactive kinase domain of the human epidermal growth factor receptor 3 (HER3)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]298
Detector technologyCCD
Collection date2009-04-05
DetectorADSC QUANTUM 315r
Wavelength(s)1.0
Spacegroup nameC 1 2 1
Unit cell lengths194.164, 47.637, 81.281
Unit cell angles90.00, 108.04, 90.00
Refinement procedure
Resolution46.463 - 2.797
R-factor0.243
Rwork0.241
R-free0.28300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inactive EGFR kinase domain
RMSD bond length0.004
RMSD bond angle0.833
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.1.1)
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.900
High resolution limit [Å]2.8002.800
Rmerge0.1010.553
Number of reflections17502
<I/σ(I)>6.91.7
Completeness [%]98.293
Redundancy3.63.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52935mM AMP-PNP, 2mM MgCl2, 1mM DTT, 1mM TCEP, 0.1M Tris pH8.5, 0.2M lithium sulfate, 25% w/v PEG 3350 supplemented with 0.2% w/v 1,2- Diaminocyclohexane sulfate, 0.2% w/v Diloxanite Furoate, 0.2% w/v Fumaric Acid, 0.2% w/v Spermine, 0.2% w/v Sulfaguanidine, 0.02M Hepes sodium pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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