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3KBL

Crystal structure of the GLD-1 homodimerization domain from Caenorhabditis elegans N169A mutant at 2.28 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Detector technologyCCD
Collection date2008-12-07
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths34.406, 42.300, 156.144
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.192 - 2.280
R-factor0.199
Rwork0.195
R-free0.26400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)CS-Rosetta model of wildtype construct with sidechain of N169 changed to A to account for mutation
RMSD bond length0.008
RMSD bond angle1.011
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.320
High resolution limit [Å]2.2802.280
Rmerge0.0660.283
Number of reflections11001
<I/σ(I)>12.14.37
Completeness [%]99.494.1
Redundancy7.45.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6295MES-Na, PEG 200, PEG 3000, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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