3HQO
Crystal structures of Leishmania mexicana pyruvate kinase (LmPYK) in complex with ATP and Oxalate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-12-08 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.98 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 107.516, 128.133, 204.361 |
Unit cell angles | 90.00, 90.03, 90.00 |
Refinement procedure
Resolution | 41.180 - 3.400 |
R-factor | 0.25243 |
Rwork | 0.251 |
R-free | 0.28951 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1pkl |
RMSD bond length | 0.007 |
RMSD bond angle | 1.009 |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.480 | 3.580 |
High resolution limit [Å] | 3.400 | 3.400 |
Rmerge | 0.210 | 0.520 |
Number of reflections | 36748 | |
<I/σ(I)> | 6.5 | 2.1 |
Completeness [%] | 96.2 | 98.5 |
Redundancy | 2.9 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.2 | 290 | 10-16% PEG8000, 20mM triethanolamine-HCl, 50mM MgCl2, 100mM KCl, 10-15% glycerol, pH7.2, VAPOR DIFFUSION, HANGING DROP, temperature 290K |