3HO7
Crystal structure of OxyR from Porphyromonas gingivalis
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 |
| Temperature [K] | 93 |
| Detector technology | IMAGE PLATE |
| Collection date | 2009-02-04 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 |
| Unit cell lengths | 55.819, 55.795, 56.711 |
| Unit cell angles | 110.63, 102.82, 114.63 |
Refinement procedure
| Resolution | 26.940 - 1.580 |
| R-factor | 0.22028 |
| Rwork | 0.219 |
| R-free | 0.24456 |
| Structure solution method | MIR |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.648 |
| Data reduction software | d*TREK |
| Data scaling software | CrystalClear |
| Phasing software | PHENIX |
| Refinement software | REFMAC (5.5.0066) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 26.940 | |
| High resolution limit [Å] | 1.580 | 1.580 |
| Rmerge | 0.032 | 0.032 |
| Number of reflections | 59646 | |
| Completeness [%] | 86.2 | 86.2 |
| Redundancy | 3.92 | 3.92 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | 12% PEG 8K, 8% EG, 0.1M HEPES BUFFER, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | 12% PEG 8K, 8% EG, 0.1M HEPES BUFFER, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | 12% PEG 8K, 8% EG, 0.1M HEPES BUFFER, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | 12% PEG 8K, 8% EG, 0.1M HEPES BUFFER, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K |






