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3GXF

Crystal structure of acid-beta-glucosidase with isofagomine at neutral pH

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Spacegroup nameP 1 21 1
Unit cell lengths110.311, 92.013, 152.362
Unit cell angles90.00, 111.21, 90.00
Refinement procedure
Resolution32.120 - 2.400
R-factor0.182
Rwork0.178
R-free0.24500
Starting model (for MR)'2NSX
RMSD bond length0.020
RMSD bond angle1.957
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC
Data quality characteristics
 Overall
Low resolution limit [Å]32.120
High resolution limit [Å]2.400
Number of reflections103572
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.52980.8 M NaH2PO4, 0.8 M KH2PO4, 0.1 M Hepes pH 7.5, SOAK with 500uM isofagomine for 10 min, glycerol in cryo, VAPOR DIFFUSION, temperature 298K

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PDB entries from 2024-05-15

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