3FMG
Structure of rotavirus outer capsid protein VP7 trimer in complex with a neutralizing Fab
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-10 |
Wavelength(s) | 0.97918 |
Spacegroup name | P 41 3 2 |
Unit cell lengths | 244.179, 244.179, 244.179 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 3.400 |
Rwork | 0.224 |
R-free | 0.23770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dbm |
RMSD bond length | 0.013 |
RMSD bond angle | 1.900 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.520 |
High resolution limit [Å] | 3.400 | 3.400 |
Rmerge | 0.114 | 0.717 |
Number of reflections | 34017 | |
<I/σ(I)> | 15.4 | 2.483 |
Completeness [%] | 97.8 | 99.2 |
Redundancy | 3.8 | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 295 | 100 mM Na citrate, 5% PEG 4K, 200 mM NaCl, 0.1 mM CaCl2, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K |