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3F0X

Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(3,5-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]77.2
Detector technologyCCD
Collection date2008-02-27
DetectorADSC QUANTUM 315
Wavelength(s)1.080900
Spacegroup nameP 61 2 2
Unit cell lengths79.048, 79.048, 108.727
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.530 - 2.600
R-factor0.214
Rwork0.212
R-free0.25500
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)Sa F98Y DHFR bound to folate and NADPH (Dale et al. J.Mol.Biol. 1997 structure not deposited in the PDB).
RMSD bond length0.011
RMSD bond angle1.627
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.5302.690
High resolution limit [Å]2.6002.600
Rmerge0.0750.286
Number of reflections5893
<I/σ(I)>4.24.3
Completeness [%]93.485.3
Redundancy8.32.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.527715 % PEG 10000, 150 mM Sodium acetate, 100 mM MES pH 6.5, 5 % Butyrlactone, VAPOR DIFFUSION, HANGING DROP, temperature 277K

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