3EOO
2.9A crystal structure of methyl-isocitrate lyase from Burkholderia pseudomallei
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-06-18 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 163.807, 172.404, 179.277 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.000 - 2.900 |
R-factor | 0.24 |
Rwork | 0.237 |
R-free | 0.29900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.522 |
Data scaling software | d*TREK (9.7L) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.280 | 48.280 | 2.800 |
High resolution limit [Å] | 2.700 | 5.810 | 2.700 |
Rmerge | 0.126 | 0.051 | 0.534 |
Total number of observations | 69750 | 64263 | |
Number of reflections | 137453 | ||
<I/σ(I)> | 15.3 | 2 | |
Completeness [%] | 98.6 | 97 | 99.2 |
Redundancy | 4.78 | 4.96 | 4.64 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 289 | 25% PEG 3350, 0.1M BIS-TRIS pH 6.5, 0.2M NaCl, VAPOR DIFFUSION, temperature 289K |