3EAE
PWWP domain of human hepatoma-derived growth factor 2 (HDGF2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 200 |
Detector technology | CCD |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97940 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.555, 59.950, 104.942 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.240 |
R-factor | 0.225 |
Rwork | 0.224 |
R-free | 0.26000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB Entries 2HTS and 2NLU |
RMSD bond length | 0.012 |
RMSD bond angle | 1.261 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 40.000 | 2.340 |
High resolution limit [Å] | 2.240 | 6.240 | 2.300 |
Rmerge | 0.084 | 0.047 | 0.647 |
Number of reflections | 12780 | ||
<I/σ(I)> | 19.947 | ||
Completeness [%] | 99.7 | 97.1 | 98.5 |
Redundancy | 6.9 | 6.2 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 298 | 2.0 M NH4SO4, 0.2 M K/Na tart, 0.1 M Na Citrate pH 5.6., VAPOR DIFFUSION, HANGING DROP, temperature 298K |