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3DWP

Crystal structure of the B-subunit of the AB5 toxin from E. Coli with Neu5Gc

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH3R
Spacegroup nameP 65
Unit cell lengths96.900, 96.900, 165.622
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution23.970 - 2.200
R-factor0.19081
Rwork0.188
R-free0.23992
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.014
RMSD bond angle1.468
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]83.9202.320
High resolution limit [Å]2.2002.200
Number of reflections39693
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.229316% PEG 3350, 100mM sodium cacodylate, 200mM ammonium fluoride, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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