3DLM
Crystal structure of Tudor domain of human Histone-lysine N-methyltransferase SETDB1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E+ DW |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2008-06-20 |
| Detector | RIGAKU RAXIS IV |
| Wavelength(s) | 1.54178 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 54.518, 63.689, 69.083 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 46.830 - 1.770 |
| R-factor | 0.21 |
| Rwork | 0.208 |
| R-free | 0.23700 |
| Structure solution method | SAD |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.369 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | SHELXD |
| Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.830 |
| High resolution limit [Å] | 1.770 | 3.810 | 1.770 |
| Rmerge | 0.049 | 0.039 | 0.178 |
| Number of reflections | 24050 | ||
| <I/σ(I)> | 42.6 | ||
| Completeness [%] | 99.7 | 99.1 | 99.6 |
| Redundancy | 6.9 | 6.8 | 6.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 1.5 microliter of the protein solution was mixed with 1.5 microliter of the reservoir solution containing 0.2 M Disodium tartrate, 20% PEG 3350 and 0.1M Hepes pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |






