Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3D8Z

RNase A- 5'-Deoxy-5'-N-pyrrolidinothymidine complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX9.6
Synchrotron siteSRS
BeamlinePX9.6
Temperature [K]100
Detector technologyCCD
Collection date2006-11-08
DetectorADSC QUANTUM 4
Wavelength(s)0.92
Spacegroup nameC 1 2 1
Unit cell lengths100.102, 32.678, 72.562
Unit cell angles90.00, 90.51, 90.00
Refinement procedure
Resolution28.600 - 1.980
R-factor0.19178
Rwork0.189
R-free0.24022
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2g8q
RMSD bond length0.010
RMSD bond angle1.580
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareREFMAC
Refinement softwareREFMAC (5.3.0037)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.030
High resolution limit [Å]1.9801.980
Number of reflections16481
<I/σ(I)>8.72.8
Completeness [%]98.9100
Redundancy2.92.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5289PEG 4000, SODIUM CITRATE, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon