Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3D4W

Crystal structure of Staphylococcal nuclease variant Delta+PHS A109R at cryogenic temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSEALED TUBE
Source detailsOTHER
Temperature [K]100
Detector technologyCCD
Collection date2006-11-10
DetectorBRUKER APEX II
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths34.090, 59.843, 73.558
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.300 - 1.900
R-factor0.197
Rwork0.191
R-free0.25200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1tqo all waters removed b = 20.0 ILE-92 truncated to ALA
RMSD bond length0.015
RMSD bond angle1.430
Data reduction softwareSAINT
Data scaling softwareSAINT
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.1002.000
High resolution limit [Å]1.9001.900
Rmerge0.0200.108
Number of reflections12416
<I/σ(I)>41.548.46
Completeness [%]99.798.4
Redundancy12.055.91
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP827743% MPD, 25 mM Potassium Phosphate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon