Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3D4J

Crystal structure of Human mevalonate diphosphate decarboxylase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU300
Temperature [K]277
Detector technologyIMAGE PLATE
Collection date2004-08-20
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths86.960, 53.190, 97.790
Unit cell angles90.00, 107.25, 90.00
Refinement procedure
Resolution29.450 - 2.400
R-factor0.218
Rwork0.218
R-free0.27400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1fi4
RMSD bond length0.007
RMSD bond angle1.400
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.4502.440
High resolution limit [Å]2.4002.400
Number of reflections33621
<I/σ(I)>18.42.9
Completeness [%]99.097.9
Redundancy3.73.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.5292MES buffer, PEG5KMME, Ammonium Sulfate, NaCl, pH 6.5, VAPOR DIFFUSION, temperature 292K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon