3D4J
Crystal structure of Human mevalonate diphosphate decarboxylase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 277 |
Detector technology | IMAGE PLATE |
Collection date | 2004-08-20 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 86.960, 53.190, 97.790 |
Unit cell angles | 90.00, 107.25, 90.00 |
Refinement procedure
Resolution | 29.450 - 2.400 |
R-factor | 0.218 |
Rwork | 0.218 |
R-free | 0.27400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fi4 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.400 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.450 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Number of reflections | 33621 | |
<I/σ(I)> | 18.4 | 2.9 |
Completeness [%] | 99.0 | 97.9 |
Redundancy | 3.7 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 292 | MES buffer, PEG5KMME, Ammonium Sulfate, NaCl, pH 6.5, VAPOR DIFFUSION, temperature 292K |