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3CMY

Structure of a homeodomain in complex with DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X12B
Synchrotron siteNSLS
BeamlineX12B
Temperature [K]100
Detector technologyCCD
Collection date2008-01-25
DetectorADSC QUANTUM 4
Wavelength(s)1.000
Spacegroup nameC 2 2 21
Unit cell lengths43.325, 62.243, 92.556
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.500 - 1.950
R-factor0.17422
Rwork0.172
R-free0.21266
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)IFJL
RMSD bond length0.010
RMSD bond angle1.533
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.4.0069)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.020
High resolution limit [Å]1.9501.950
Number of reflections9726
<I/σ(I)>273
Completeness [%]99.7100
Redundancy7.66.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.629319-22% polyethylene glycol 8000, 100 mM ammonium sulphate, 20mM magnesium chloride, 15% 2-methyl-2,4-pentanediol, 50 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid, pH 7.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111polyethylene glycol 8000
10122-methyl-2,4-pentanediol
11124-(2-hydroxyethyl)-1-piperazineethanesulfonic acid
1212H2O
211ammonium sulphate
311magnesium chloride
4112-methyl-2,4-pentanediol
5114-(2-hydroxyethyl)-1-piperazineethanesulfonic acid
611H2O
712polyethylene glycol 8000
812ammonium sulphate
912magnesium chloride

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