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3BIF

6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE EMPTY 6-PF-2K ACTIVE SITE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]120
Detector technologyIMAGE PLATE
Collection date1997-10-09
DetectorMACSCIENCE
Spacegroup nameC 1 2 1
Unit cell lengths106.700, 108.700, 71.700
Unit cell angles90.00, 129.50, 90.00
Refinement procedure
Resolution30.000 - 2.300
R-factor0.197

*

Rwork0.197
R-free0.24300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1bif
RMSD bond length0.008
RMSD bond angle21.600

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.350
High resolution limit [Å]2.3002.300
Rmerge0.039

*

Number of reflections23883
<I/σ(I)>36.57.16
Completeness [%]88.184.9
Redundancy2.642.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.5

*

4

*

PROTEIN WAS CRYSTALLIZED FROM 50MM SUCCINATE, PH 5.5, 50MM TRIS-PO4, PH 7.5, 11% PEG 4000, 100UM EDTA, 10MM DTT, 10% GLYCEROL, 3MM MGCL2., pH 7.0
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropRT2K-Wo10 (mg/ml)
101reservoirsuccinate50 (mM)
111reservoirTris-PO450 (mM)
121reservoirEDTA0.100 (mM)
131reservoirdithiothreitol10 (mM)
141reservoirglycerol10 (%)
151reservoir3 (mM)
21dropTris-PO450 (mM)
31dropglycerol5 (%)
41dropEDTA0.100 (mM)
51dropdithiothreitol10 (mM)
61dropoctyl beta-D-glucopyranoside0.5 (%)
71dropF6P3 (mM)
81dropAMP-PNP1 (mM)
91reservoirPEG400011 (%)

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PDB entries from 2024-05-15

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