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3BDY

Dual specific bH1 Fab in complex with VEGF

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2006-07-13
DetectorADSC QUANTUM 315
Wavelength(s)1.00
Spacegroup nameC 2 2 21
Unit cell lengths100.600, 197.978, 77.650
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 2.600
R-factor0.197
Rwork0.194
R-free0.25200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1n8z
RMSD bond length0.010
RMSD bond angle1.255
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.690
High resolution limit [Å]2.6002.600
Number of reflections24705
<I/σ(I)>163
Completeness [%]99.8100
Redundancy6.26.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.5292For crystallization of the Fab/VEGF (8-109) complex, equal volumes of protein complex solution (10.6 mg/ml protein, 300 mM NaCl, 25 mM Tris-HCl pH 7.5) and crystallization buffer containing 0.15 D, L Malic Acid pH 7.0, 20% PEG3350 were mixed and equilibrated at 19 C. Prior to data collection the crystals were cryo-protected by transfer between drops containing 5%, 10% and 15% Glycerol in artificial mother liquor, followed by flash freeze in liquid nitrogen, VAPOR DIFFUSION, temperature 292K

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