3AJM
Crystal structure of programmed cell death 10 in complex with inositol 1,3,4,5-tetrakisphosphate
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2008-10-26 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97888, 0.97928, 0.96405 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 89.830, 89.830, 114.200 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.915 - 2.300 |
R-factor | 0.216 |
Rwork | 0.213 |
R-free | 0.26410 |
Structure solution method | MAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.676 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SOLVE |
Refinement software | PHENIX ((phenix.refine: 1.6.1_357)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.170 | 2.420 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.083 | 0.317 |
Number of reflections | 21428 | |
<I/σ(I)> | 14.6 | 5.8 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.1 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 30% PEG, 0.1M sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 30% PEG, 0.1M sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K |