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39JO

X-ray crystallographic structure model of Lactococcus lactis prolidase mutant Del101

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2026-07-30
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.954
Spacegroup nameI 21 21 21
Unit cell lengths83.290, 84.130, 131.900
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.050 - 1.750
R-factor0.162
Rwork0.161
R-free0.19360
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.728
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (2.0_5936)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.0501.800
High resolution limit [Å]1.7501.750
Number of reflections880183142
<I/σ(I)>10.61.07
Completeness [%]97.3
Redundancy6.9
CC(1/2)0.9900.510
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.150.1 M calcium acetate, 0.1 M Bis-Tris propane, 15-20% w/v PEG4000

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PDB entries from 2026-11-04

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