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36IQ

Structure of de novo designed doxorubicin binding protein with doxorubicin bound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2026-03-10
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.11582
Spacegroup nameP 32 2 1
Unit cell lengths42.700, 42.700, 174.710
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution58.240 - 1.560
R-factor0.2211
Rwork0.218
R-free0.25520
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle0.994
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (2.0_5848)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]87.3501.590
High resolution limit [Å]1.5601.560
Rmerge0.1771.557
Rmeas0.1821.609
Number of reflections274411348
<I/σ(I)>193.8
Completeness [%]99.7
Redundancy35.330.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293500 mM HEPES, 489 mM Sodium Citrate,68.5 mM Sodium Chloride, 5 mM Sodium phosphate dibasic, 0.9 mM Potassium phosphate monobasic, 1.35 mM Potassium chloride, pH 7.25

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PDB entries from 2026-06-24

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