352D
THE CRYSTAL STRUCTURE OF A PARALLEL-STRANDED PARALLEL-STRANDED GUANINE TETRAPLEX AT 0.95 ANGSTROM RESOLUTION
Experimental procedure
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE BW7B |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | BW7B |
Temperature [K] | 100 |
Spacegroup name | P 1 |
Unit cell lengths | 28.280, 34.780, 56.230 |
Unit cell angles | 74.31, 77.68, 89.81 |
Refinement procedure
Resolution | ? - 0.950 |
R-factor | 0.152 |
Starting model (for MR) | NDB ENTRY UDF063 (PDB ENTRY 244D) |
Data reduction software | DENZO |
Refinement software | SHELXL93 |
Data quality characteristics
Overall | Outer shell | |
High resolution limit [Å] | 0.950 | 0.950 * |
Rmerge | 0.069 * | 0.146 * |
Number of reflections | 112719 | 5470 * |
Completeness [%] | 88.8 | 85.9 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 4-6 * | pH 6.60, VAPOR DIFFUSION, HANGING DROP, temperature 278.00K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 4-6 * | pH 6.60, VAPOR DIFFUSION, HANGING DROP, temperature 278.00K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | WATER | ||
10 | 1 | 2 | CACL2 | ||
11 | 1 | 2 | SPERMINE_HCL | ||
12 | 1 | 2 | NACL | ||
2 | 1 | 1 | MPD | ||
3 | 1 | 1 | NA CACODYLATE | ||
4 | 1 | 1 | CACL2 | ||
5 | 1 | 1 | SPERMINE_HCL | ||
6 | 1 | 1 | NACL | ||
7 | 1 | 2 | WATER | ||
8 | 1 | 2 | MPD | ||
9 | 1 | 2 | NA CACODYLATE |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | sodium cacodylate-HCl | 20 (mM) | |
10 | 1 | reservoir | MPD | 26-32 (%) | |
2 | 1 | drop | 12 (mM) | ||
3 | 1 | drop | spermine tetrahydrochloride | 6 (mM) | |
4 | 1 | drop | 130-180 (mM) | ||
5 | 1 | drop | MPD | 5 (%(v/v)) | |
6 | 1 | drop | d(TG4T) | 1 (mM) | |
7 | 1 | reservoir | sodium cacodylate-HCl | 120 (mM) | |
8 | 1 | reservoir | 70 (mM) | ||
9 | 1 | reservoir | 0.7-1 (M) |