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313D

Z-DNA HEXAMER WITH 5' OVERHANGS THAT FORM A REVERSE HOOGSTEEN BASE PAIR

Experimental procedure
Source typeSEALED TUBE
Temperature [K]293
Detector technologyAREA DETECTOR
Collection date1996-05-01
DetectorSIEMENS HI-STAR
Spacegroup nameP 21 21 21
Unit cell lengths20.340, 29.620, 51.930
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.000 - 1.680
R-factor0.207
Rwork0.207
R-free0.28700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.480
Data reduction softwareSAINT
Data scaling softwareSAINT
Refinement softwareX-PLOR
Data quality characteristics
 Overall
Low resolution limit [Å]29.600

*

High resolution limit [Å]1.680
Rmerge0.086
Total number of observations28961

*

Number of reflections5324
Completeness [%]84.5
Redundancy2.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7pH 7.00, VAPOR DIFFUSION, SITTING DROP
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111WATER
211MPD
311NA CACODYLATE
411MGCL2
511[CO(NH3)6]3+
612MPD
712WATER
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropDNA0.5 (mM)single stranded
21dropsodium cacodylate50 (mM)
31drop1 (mM)
41dropcobalt hexammine2.5 (mM)
51dropMPD5 (%(v/v))
61reservoir17 (%)

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PDB entries from 2025-07-02

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