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309D

A DNA DECAMER WITH A STICKY END: THE CRYSTAL STRUCTURE OF D-CGACGATCGT

Replaces:  273D
Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]153
Detector technologyDIFFRACTOMETER
DetectorRIGAKU AFC-5R
Spacegroup nameP 1 21 1
Unit cell lengths26.450, 34.660, 32.170
Unit cell angles90.00, 113.40, 90.00
Refinement procedure
Resolution8.000 - 2.600
R-factor0.214
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.023
RMSD bond angle0.031
Refinement softwareNUCLSQ
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]3.600
High resolution limit [Å]2.6002.600
Number of reflections1768
Completeness [%]75
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111WATER
211MPD
311MG ACETATE
411SPERMINE
512WATER
612MPD
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropDNA1 (mM)
21dropmagnesium acetate30 (mM)
31dropspermine1 (M)
41dropMPD10 (%(v/v))
51reservoirMPD15 (%)

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PDB entries from 2024-05-15

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