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2ZZ8

Crystal structure of LipL32, the most abundant surface protein of pathogenic leptospira spp

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH3R
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 32 2 1
Unit cell lengths125.895, 125.895, 95.991
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution37.880 - 2.010
R-factor0.1831
Rwork0.181
R-free0.21630
Structure solution methodSAD
RMSD bond length0.012
RMSD bond angle1.392
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareSHELXS
Refinement softwareREFMAC (5.4.0077)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.110
High resolution limit [Å]2.0002.000
Rmerge0.0780.720
Number of reflections59453
<I/σ(I)>41.92.4
Completeness [%]100.0100
Redundancy21.420.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.22942.0M sodium malonate, 0.1M sodium cacodylate, 4%(v/v) butyrolactone, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 294K
1VAPOR DIFFUSION, HANGING DROP6.22942.0M sodium malonate, 0.1M sodium cacodylate, 4%(v/v) butyrolactone, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 294K
1VAPOR DIFFUSION, HANGING DROP6.22942.0M sodium malonate, 0.1M sodium cacodylate, 4%(v/v) butyrolactone, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 294K

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PDB entries from 2024-10-09

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