2ZVU
Crystal structure of rat heme oxygenase-1 in complex with ferrous verdoheme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-06-28 |
Detector | RIGAKU JUPITER 210 |
Wavelength(s) | 1.0 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 65.346, 65.346, 120.240 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.670 - 2.200 |
R-factor | 0.19185 |
Rwork | 0.189 |
R-free | 0.24005 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ubb |
RMSD bond length | 0.011 |
RMSD bond angle | 1.792 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.068 | 0.342 |
Number of reflections | 15371 | |
<I/σ(I)> | 12.5 | 2.9 |
Completeness [%] | 98.9 | 90.7 |
Redundancy | 4.9 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 4.0M sodium formate, 10mM sodium azide, pH7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |