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2YMT

gamma 2 adaptin EAR domain crystal structure with phage peptide GEEWGPWV

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]93
Detector technologyIMAGE PLATE
Collection date2012-09-25
DetectorRIGAKU IMAGE PLATE
Spacegroup nameP 21 21 21
Unit cell lengths34.803, 37.772, 105.471
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.708 - 1.802
R-factor0.1876
Rwork0.185
R-free0.24200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4bcx
RMSD bond length0.006
RMSD bond angle1.098
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.7101.900
High resolution limit [Å]1.8001.800
Rmerge0.1000.490
Number of reflections13212
<I/σ(I)>11.62.7
Completeness [%]97.78
Redundancy6.43.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
16.5100 MM MES/IMIDAZOLE PH 6.5, 0.02 M 1,6-HEXANEDIOL, 0.02 M 1-BUTANOL, 0.02 M (RS)-1,2- PROPANEDIOL, 0.02 M 2-PROPANOL, 0.02 M 1,4-BUTANEDIOL, 0.02 M 1,3-PROPANEDIOL, 10% (W/V) PEG 20000 AND 24% (V/V) PEG400 (USING A 2:1 RATIO OF PROTEIN TO MOTHER LIQUOR)

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