2YJT
Crystal structure of E. coli DEAD-box protein SrmB bound to regulator of ribonuclease activity A (RraA)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-01-29 |
Detector | ADSC CCD |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 73.390, 73.390, 222.891 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 74.300 - 2.900 |
R-factor | 0.19544 |
Rwork | 0.192 |
R-free | 0.25658 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1q5x |
RMSD bond length | 0.015 |
RMSD bond angle | 1.590 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 63.560 | 3.060 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.120 | 0.510 |
Number of reflections | 15208 | |
<I/σ(I)> | 10.2 | 2.8 |
Completeness [%] | 99.6 | 99.5 |
Redundancy | 4 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.2 | 289 | CRYSTALS WERE PREPARED USING THE HANGING DROP METHOD AT 16 DEG. C BY MIXING 1:1 PROTEIN SAMPLE WITH MOTHER LIQUOR: 100 MM MAGNESIUM ACETATE, 100 MM MOPS PH 7.2 AND 12% W/V PEG 8000.THE CRYSTALS WERE TRANSFERRED BRIEFLY TO RESERVOIR SOLUTION SUPPLEMENTED WITH 25% (V/V) GLYCEROL AND FLASH FROZEN IN LIQUID NITROGEN. |