2YEV
Structure of caa3-type cytochrome oxidase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-17 |
Detector | MARRESEARCH |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 127.250, 76.030, 300.267 |
Unit cell angles | 90.00, 92.21, 90.00 |
Refinement procedure
Resolution | 77.179 - 2.360 |
R-factor | 0.1736 |
Rwork | 0.171 |
R-free | 0.21830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2occ |
RMSD bond length | 0.006 |
RMSD bond angle | 1.084 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE: 1.6.4_486)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.480 | 2.490 |
High resolution limit [Å] | 2.360 | 2.360 |
Rmerge | 0.160 | 0.980 |
Number of reflections | 118251 | |
<I/σ(I)> | 9.5 | 2.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.4 | 8.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5 | 16-21% PEG 400, 0.1 M NA CITRATE PH 4.5-5.0, 0-0.1 M LITHIUM SULPHATE, 0.1 M NACL. CRYSTALLISED USING THE LIPIDIC CUBIC PHASE USING 7.7 MAG AS THE HOSTING LIPID. | |
1 | LIPIDIC CUBIC PHASE | 5 | 16-21% PEG 400, 0.1 M NA CITRATE PH 4.5-5.0, 0-0.1 M LITHIUM SULPHATE, 0.1 M NACL. CRYSTALLISED USING THE LIPIDIC CUBIC PHASE USING 7.7 MAG AS THE HOSTING LIPID. |