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2YD1

Crystal structure of the N-terminal Ig1-2 module of Drosophila Receptor Protein Tyrosine Phosphatase DLAR

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyCCD
DetectorMARMOSAIC 225 mm CCD
Spacegroup nameC 1 2 1
Unit cell lengths124.201, 29.074, 49.408
Unit cell angles90.00, 107.29, 90.00
Refinement procedure
Resolution47.175 - 1.800
R-factor0.1819
Rwork0.180
R-free0.22330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2yd4
RMSD bond length0.006
RMSD bond angle1.123
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.850
High resolution limit [Å]1.8001.800
Rmerge0.0800.530
Number of reflections16271
<I/σ(I)>19.63.1
Completeness [%]100.0100
Redundancy5.65.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1525% W/V PEG 1500, 0.1M SPG SYSTEM, 35MM AMMONIUM SULPHATE, PH 5.0

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PDB entries from 2024-10-30

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