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2Y5P

B-repeat of Listeria monocytogenes InlB (internalin B)

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorMAR555 FLAT PANEL
Spacegroup nameP 21 21 21
Unit cell lengths28.610, 58.340, 158.070
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.000 - 1.300
R-factor0.15827
Rwork0.157
R-free0.19559
Structure solution methodMAD
Starting model (for MR)NONE
RMSD bond length0.024
RMSD bond angle2.097
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELXD
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.0001.330
High resolution limit [Å]1.3001.300
Rmerge0.0700.720
Number of reflections66287
<I/σ(I)>31.82.98
Completeness [%]99.999.3
Redundancy22.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION29320 DEG C IN HANGING OR SITTING-DROPS WITH 2 UL PROTEIN (17.3 MG/ML) PLUS 1 UL RESERVOIR (0.1 M NA-ACETATE PH 5.0, 0.2 M CACL2, 18 % PEG 6000).
1VAPOR DIFFUSION29320 DEG C IN HANGING OR SITTING-DROPS WITH 2 UL PROTEIN (17.3 MG/ML) PLUS 1 UL RESERVOIR (0.1 M NA-ACETATE PH 5.0, 0.2 M CACL2, 18 % PEG 6000).

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PDB entries from 2024-07-17

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