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2Y4O

Crystal Structure of PaaK2 in complex with phenylacetyl adenylate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH
Spacegroup nameP 1 21 1
Unit cell lengths69.150, 81.970, 80.890
Unit cell angles90.00, 97.27, 90.00
Refinement procedure
Resolution40.990 - 1.900
R-factor0.16807
Rwork0.166
R-free0.21404
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2y4n
RMSD bond length0.007
RMSD bond angle0.962
Data reduction softwareiMOSFLM
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.000
High resolution limit [Å]1.9001.900
Rmerge0.0900.330
Number of reflections69914
<I/σ(I)>9.23.1
Completeness [%]96.092.9
Redundancy4.13.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1PROTEIN INCUBATED IN 3 MM MGCL2, ATP, AND 5 MM PHENYLACETIC ACID FOR 1 HR AND CRYSTALLIZED IN 17% (W/V) PEG 6000, 0.1 M HEPES PH 7.5, 0.1 M KCL AND 2.5% GLYCEROL.

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PDB entries from 2024-10-09

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