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2X0I

2.9 A RESOLUTION STRUCTURE OF MALATE DEHYDROGENASE FROM ARCHAEOGLOBUS FULGIDUS IN COMPLEX WITH NADH

Replaces:  1OJS
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-4
Synchrotron siteESRF
BeamlineID14-4
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameP 41 21 2
Unit cell lengths112.964, 112.964, 71.294
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.480 - 2.910
R-factor0.1557
Rwork0.152
R-free0.21860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2hlp
RMSD bond length0.008
RMSD bond angle1.461
Data reduction softwareXDS
Data scaling softwareBIOMOL
Phasing softwareAMoRE
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]59.7603.010
High resolution limit [Å]2.9102.910
Rmerge0.0500.100
Number of reflections8949
<I/σ(I)>26.99.7
Completeness [%]83.645.4
Redundancy8.73.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
14INITIAL PROTEIN DROPLET: 16 MG/ML PROTEIN, 10 MM NADH, 20 M RESERVOIR: 1.6 M AMMONIUM SULPHATE, 20% (V/V) GLYCEROL, 80 M DROPLET: EQUAL VOLUMES OF INITIAL PROTEIN DROPLET AND RESERVOIR WERE MIXED., pH 4.0

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PDB entries from 2024-07-17

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