2X0I
2.9 A RESOLUTION STRUCTURE OF MALATE DEHYDROGENASE FROM ARCHAEOGLOBUS FULGIDUS IN COMPLEX WITH NADH
Replaces: 1OJSExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC CCD |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 112.964, 112.964, 71.294 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.480 - 2.910 |
R-factor | 0.1557 |
Rwork | 0.152 |
R-free | 0.21860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hlp |
RMSD bond length | 0.008 |
RMSD bond angle | 1.461 |
Data reduction software | XDS |
Data scaling software | BIOMOL |
Phasing software | AMoRE |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.760 | 3.010 |
High resolution limit [Å] | 2.910 | 2.910 |
Rmerge | 0.050 | 0.100 |
Number of reflections | 8949 | |
<I/σ(I)> | 26.9 | 9.7 |
Completeness [%] | 83.6 | 45.4 |
Redundancy | 8.7 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 4 | INITIAL PROTEIN DROPLET: 16 MG/ML PROTEIN, 10 MM NADH, 20 M RESERVOIR: 1.6 M AMMONIUM SULPHATE, 20% (V/V) GLYCEROL, 80 M DROPLET: EQUAL VOLUMES OF INITIAL PROTEIN DROPLET AND RESERVOIR WERE MIXED., pH 4.0 |