Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2WYR

3-D structure of PhTET1-12s, dodecamer in the asymmetric unit

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyCCD
Collection date2006-06-18
DetectorADSC CCD
Spacegroup nameP 1 21 1
Unit cell lengths113.263, 205.218, 113.488
Unit cell angles90.00, 100.78, 90.00
Refinement procedure
Resolution49.684 - 2.245
R-factor0.1726
Rwork0.170
R-free0.21990
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2cf4 DODECAMER RECONSTRUCTED USING CRYSTALLOGRAPHIC SYMMETRY OPERATORS
RMSD bond length0.008
RMSD bond angle1.205
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]111.4802.380
High resolution limit [Å]2.2402.240
Rmerge0.0900.470
Number of reflections1810946
<I/σ(I)>17.84.63
Completeness [%]99.195.1
Redundancy7.57.45
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5HANGING DROP. MOTHER LIQUOR: 1 ML OF 0.1 M TRIS-HCL, PH 7.5, 20% (W/V) PEG 3350, 0.2 M TRIMETHYLAMINE N-OXIDE. DROP: 2 UL OF MOTHER LIQUOR PLUS 2 UL OF A 6.2 MG/ML PROTEIN SOLUTION IN 20 MM TRIS-HCL, 150 MM NACL, PH 7.5. CRYSTALS AFTER 2 WEEKS. CRYOPROTECTING SOLUTION: 0.1 M TRIS-HCL, PH 7.5, 20% (W/V) PEG 3350, 0.2 M TRIMETHYLAMINE N-OXIDE, 20% (V/V) ETHYLENE GLYCOL

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon