Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2VYX

Crystal structure of the T. thermophilus dodecin W38F mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-2
Synchrotron siteESRF
BeamlineID14-2
Temperature [K]100
Detector technologyCCD
Collection date2007-11-16
DetectorADSC CCD
Spacegroup nameP 21 21 21
Unit cell lengths67.630, 98.550, 139.840
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution9.990 - 1.500
R-factor0.22
Rwork0.218
R-free0.25000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2v18
RMSD bond length0.009
RMSD bond angle1.423
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]9.9901.540
High resolution limit [Å]1.5001.500
Rmerge0.0700.370
Number of reflections178447
<I/σ(I)>6.72.1
Completeness [%]97.496.5
Redundancy4.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
10.2 M AMMONIUM ACETATE, 0.1 M SODIUM CITRATE, PH 5.2, 22.5 % MPD

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon