2VAB
MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND SENDAI VIRUS NUCLEOPROTEIN
Replaces: 1VABExperimental procedure
Detector technology | AREA DETECTOR |
Detector | SIEMENS |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 139.000, 90.400, 46.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 6.000 - 2.500 |
R-factor | 0.159 |
Rwork | 0.159 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.800 |
Data reduction software | XENGEN |
Phasing software | X-PLOR (3.1) |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | |
High resolution limit [Å] | 2.500 * |
Rmerge | 0.108 |
Total number of observations | 78975 * |
Number of reflections | 16934 |
Completeness [%] | 81.0 |
Redundancy | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 6.25 * | 22.5 * | used to seeding * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | H-2Kb-peptide complex | 4-6 (mg/ml) | |
2 | 1 | drop | sodium potassium phosphate | 1.84 (M) | |
3 | 1 | drop | MPD | 2 (%) |