2V2T
X-ray structure of a NF-kB p50-RelB-DNA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 105 |
Detector technology | CCD |
Detector | ADSC CCD |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 91.440, 91.440, 419.970 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.900 - 3.050 |
R-factor | 0.238 |
Rwork | 0.238 |
R-free | 0.27600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vkx |
RMSD bond length | 0.007 |
RMSD bond angle | 1.400 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AMoRE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.150 |
High resolution limit [Å] | 3.040 | 3.040 |
Rmerge | 0.060 | 0.510 |
Number of reflections | 19931 | |
<I/σ(I)> | 12 | 2.5 |
Completeness [%] | 96.0 | 91 |
Redundancy | 12.8 | 9.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7 | 5% PEG3350 100 MM NACITRATE 1MM SPERMINE 5MM DTT, pH 7 |