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2SBA

SOYBEAN AGGLUTININ COMPLEXED WITH 2,6-PENTASACCHARIDE

Replaces:  1SBA
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]287
Detector technologyAREA DETECTOR
DetectorSIEMENS
Spacegroup nameP 64 2 2
Unit cell lengths144.900, 144.900, 109.400
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution90.000 - 2.600
Rwork0.208
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ltn
RMSD bond length0.016
RMSD bond angle20.370

*

Data reduction softwareX-GEN
Data scaling softwareX-GEN
Phasing softwareX-PLOR
Refinement softwareTNT (5E)
Data quality characteristics
 Overall
Low resolution limit [Å]90.000
High resolution limit [Å]2.400
Rmerge0.126
Number of reflections17287
Completeness [%]81.0
Redundancy3.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

7.24

*

0.1 M HEPES, PH 7.2; 1 MM CACL2; 1 MM MNCL2 0.5 M NACL
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
1120.1 M HEPES, PH 7.2
2121 MM CACL2
3121 MM MMCL2
4120.5 M NACL
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropSBA34 (mg/ml)
21dropsugar0.755 (M)
31dropHEPES0.1 (M)
41drop1 (mM)
51drop1 (mM)
61drop0.15 (M)
71reservoirHEPES0.1 (M)
81reservoir0.5 (M)

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PDB entries from 2024-12-04

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