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2R7S

Crystal Structure of Rotavirus SA11 VP1 / RNA (UGUGCC) complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2006-02-22
DetectorADSC QUANTUM 315
Wavelength(s)0.97949
Spacegroup nameP 21 21 21
Unit cell lengths77.118, 112.664, 144.844
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 3.240
Rwork0.213
R-free0.28300
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHARP
Refinement softwareCNS
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0003.310
High resolution limit [Å]3.2406.8703.240
Rmerge0.0980.0390.404
Number of reflections18356
<I/σ(I)>10.1
Completeness [%]88.986.185.7
Redundancy4.54.53.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72851 microliter of VP1 at 10 mg/ml in 25 mM Na-HEPES, pH 7.8, 100 mM NaCl mixed with 2 microliter of crystallization buffer [25 mM Na-MES, pH 6.5, 1.5% (w/v) PEG 3350] and allowing the drop to equilibrate at 12 C by hanging-drop vapor diffusion with a well solution identical in composition to the drop except for the protein. With micro-seeding, thin, plate-like crystals appeared after 1 day and grew to full size in about two weeks., pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 285K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111Na-HEPES
211NaCl
312Na-MES
412PEG 3350]

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