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2QGD

Human transthyretin (TTR) complexed with 2-(3,5-Dibromo-4-hydroxyphenyl)benzoxazole

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Detector technologyCCD
Collection date2007-01-11
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.912
Spacegroup nameP 21 21 2
Unit cell lengths42.945, 85.001, 65.097
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.500
R-factor0.162
Rwork0.160
R-free0.19900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Human Transthyretin PDB 2FBR
RMSD bond length0.019
RMSD bond angle1.757
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.530
High resolution limit [Å]1.5001.500
Number of reflections38438
<I/σ(I)>114.5
Completeness [%]99.9100
Redundancy14.514.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5298The WT-TTR was concentrated to 4 mg/mL in 10 mM NaPi, 100 mM KCl, at pH 7.6 and co-crystallized at room temperature with inhibitors using the vapor-diffusion sitting drop method. Crystals were grown from 1.395 M sodium citrate, 3.5% v/v glycerol at pH 5.5. The crystals were frozen using a cryo-protectant solution of 1.395 M sodium citrate, pH 5.5, containing 10% v/v glycerol., VAPOR DIFFUSION, SITTING DROP, temperature 298.0K

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