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2QGB

Human transthyretin (TTR) in Apo-form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Detector technologyCCD
Collection date2007-01-11
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.9791
Spacegroup nameP 21 21 2
Unit cell lengths42.850, 85.398, 64.351
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.400
R-factor0.167
Rwork0.166
R-free0.18800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Human Transthyretin PDB 2FBR
RMSD bond length0.019
RMSD bond angle1.826
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.430
High resolution limit [Å]1.4001.400
Rmerge0.459
Number of reflections47065
<I/σ(I)>13.94.2
Completeness [%]99.9100
Redundancy6.86.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5298The WT-TTR was concentrated to 4 mg/mL in 10 mM NaPi, 100 mM KCl, at pH 7.6 and co-crystallized at room temperature using the vapor-diffusion sitting drop method. Crystals were grown from 1.395 M sodium citrate, 3.5% v/v glycerol at pH 5.5. The crystals were frozen using a cryo-protectant solution of 1.395 M sodium citrate, pH 5.5, containing 10% v/v glycerol., VAPOR DIFFUSION, SITTING DROP, temperature 298.0K

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