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2Q30

Crystal structure of a rmlc-like cupin protein (dde_2303) from desulfovibrio desulfuricans subsp. at 1.94 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.3
Synchrotron siteALS
Beamline5.0.3
Temperature [K]100
Detector technologyCCD
Collection date2006-09-10
DetectorADSC QUANTUM 315
Wavelength(s)1.00000
Spacegroup nameP 1 21 1
Unit cell lengths43.140, 133.950, 74.660
Unit cell angles90.00, 93.04, 90.00
Refinement procedure
Resolution29.025 - 1.940
R-factor0.169
Rwork0.167
R-free0.21200
Structure solution methodSAD
RMSD bond length0.014
RMSD bond angle1.791
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELX
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.02529.0252.010
High resolution limit [Å]1.9404.1701.940
Rmerge0.0600.0320.317
Number of reflections60310109837201
<I/σ(I)>8.4516.72.5
Completeness [%]81.587.157
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5293NANODROP, 35.0% PEG 3000, 0.2M Sodium chloride, 0.1M Tris-HCl pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
2VAPOR DIFFUSION, SITTING DROP8293NANODROP, 40.0% PEG 3000, 0.2M Sodium chloride, 0.1M Tris-HCl pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K

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