Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2PVI

PVUII ENDONUCLEASE COMPLEXED TO AN IODINATED COGNATE DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X12C
Synchrotron siteNSLS
BeamlineX12C
Temperature [K]289
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 21 21 21
Unit cell lengths95.800, 86.300, 48.500
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.500 - 1.760
R-factor0.188
Rwork0.188
R-free0.25500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1pvi
RMSD bond length0.008
RMSD bond angle1.400
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.5001.840
High resolution limit [Å]1.7601.760
Rmerge0.054
<I/σ(I)>14.1
Completeness [%]77.323.7
Redundancy3.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.5pH 4.5, VAPOR DIFFUSION, HANGING DROP

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon