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2PMV

Crystal Structure of Human Intrinsic Factor- Cobalamin Complex at 2.6 A Resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 8-BM
Synchrotron siteAPS
Beamline8-BM
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315
Wavelength(s)1.6059
Spacegroup nameP 1 21 1
Unit cell lengths90.100, 67.300, 147.700
Unit cell angles90.00, 96.80, 90.00
Refinement procedure
Resolution37.530 - 2.600
R-factor0.213
Rwork0.213
R-free0.24900
Structure solution methodSAD
RMSD bond length0.013
RMSD bond angle1.900
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSHELXD
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.600
High resolution limit [Å]2.5002.500
Rmerge0.0700.491
Number of reflections55707
<I/σ(I)>16.52.2
Completeness [%]91.154.7
Redundancy3.53.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP629510% PEG20000, 100mM MES, 20mM CaCL2 and 9mM BaCL2, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K

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PDB entries from 2026-01-14

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