2PJP
Structure of the mRNA-binding domain of elongation factor SelB from E.coli in complex with SECIS RNA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE BM30A |
| Synchrotron site | ESRF |
| Beamline | BM30A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2005-11-19 |
| Detector | MAR CCD 165 mm |
| Wavelength(s) | 0.9797 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 103.498, 56.515, 48.414 |
| Unit cell angles | 90.00, 95.60, 90.00 |
Refinement procedure
| Resolution | 51.500 - 2.300 |
| R-factor | 0.204 |
| Rwork | 0.200 |
| R-free | 0.25100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1wsu |
| RMSD bond length | 0.021 |
| RMSD bond angle | 2.463 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 51.503 | 18.330 | 2.110 |
| High resolution limit [Å] | 2.000 | 6.320 | 2.000 |
| Rmerge | 0.101 | 0.047 | 0.940 |
| Total number of observations | 1931 | 6524 | |
| Number of reflections | 18032 | ||
| <I/σ(I)> | 5 | 12.6 | 0.6 |
| Completeness [%] | 95.7 | 92.4 | 92.8 |
| Redundancy | 3.5 | 3.3 | 2.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 298 | 6.7 mM calcium chloride, 33 mM sodium acetate ,10% 2-methyl-2,4-pentanediol, 0.17M sodium fluoride (final), pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | calcium chloride | ||
| 2 | 1 | 1 | sodium acetate | ||
| 3 | 1 | 1 | 2-methyl-2,4-pentanediol | ||
| 4 | 1 | 1 | sodium fluoride | ||
| 5 | 1 | 2 | calcium chloride | ||
| 6 | 1 | 2 | sodium acetate | ||
| 7 | 1 | 2 | 2-methyl-2,4-pentanediol | ||
| 8 | 1 | 2 | sodium fluoride |






